what are these holes ?
Looks like someone drilled these to knock out the bearing .
As I said before , if you or somebody else intend to actually ride this bike , I URGENTLY advise you to do something about the way the inner primary case is fixed to the engine case . Now , before you install the crankshaft , you have the opportunity to install 2 studs , at 9 and 3 o'clock with a flat head so that they clear the crank . In the holes at 1 and 5 o'clock you can only install the original cheese head screws, because of clearance with the chain .
If you decide not to do this , and these 3 screws come loose ( and they will ) this will have some annoying consequences , like screws being caught by the chain , loss of electrical power , etc ..; And getting access to these screws afterwards is a hell of a job !
I dug up an old inner primary from my attic to illustrate my desperate but futile attempts to keep these 3 srews tight .
loctite only helps for a short while . Maybe loctite 648 can hold them in , but i didn't had that at the time :
(Ultimately , it's your decision ).