First: Removing the old ISO bushes. I have had them push out with minimal effort using just a 1/2" breaker bar, and I have had to struggle mightily and resort to using a hydraulic press. The difference is rust which comes and grows with poor storage and excessive exposure to water kicked up by the tires, a lot of which contains salt, especially in the "rust belt".
Second: Cleaning the tubes. There are countless ways to clear the tubes from drill mounted wire brushes to bead blasting to brake hones. Your imagination and wallet are good guides. Whether you paint or coat or leave bear the interior is up to you.
Third: The threaded rod and sockets. Any hardware store sells threaded rod, a 3/8" piece will fit easily through the center of the ISO bush, purchase standard nuts (3) and large washers. The issue here is getting the last large rubber donut into the tube; if your tube is mirror smooth it may just "pop" in, assumes silicon grease is utilized. If you are not so lucky place a socket on the protruding end that fits over the central, but is smaller than the ID of the tube. On the receiving end select a socket that will butt against tube. Insert the threaded rod, washers and spin on the nuts; good idea to lock two nuts together on the protruding end. Hold the two nuts locked together by the outer nut, turn the single nut on the receiving end and the ISO mount will be drawn right in. You may have to go past the set point because the formerly protruding end's bush will become concave. Once the bush is in, and past it's set point, reverse the process which will flatten the concave bush and bring the ISO mount to the correct set point. Yu can do this without the threaded rod if you have a hydraulic press handy; you'll still need one socket.
I use, and offer kits with stainless steel end caps, be aware that there is a correct left and right side to the new bush, so install it once and install it right (instructions included). The set screw (grub screw) is for the stationary side so you shouldn't need to punch a hole in the gaiter; set it and forget it. Having the set screw available may offer you additional options, I can't say.