I restored my Commando in 1999. New pipes. Don't remember the brand. One pipe split length wise for about 3 inches after about 2,000 miles. Got another set of a different brand from the same vendor. As a matter of fact, the new pipes have the MkIII collets. The vendor is a well known Norton parts supplier. The new pipes are still going great after some 20,000 miles. Lead me to believe there are some bad pipes out there. Same installation, same iso rubbers. As for welding cracks, you are creating a stress point at the weld and if someone can weld without burning the chrome, my hat's off to them.
Just hand tighten the rosebuds, tighten the muffler clamp, then tighten the isos. The isos should be straight and not in a strain. Lastly, get your Norton exhaust nut wrench and put a 3 foot cheater on it and tighten the beejeezs out of the rosebuds. Might do to have someone sit on the bike while you tighten the right side rosebud. I did safety wire mine, but I never had an exhaust nut loosen.