Yes that is what I found on all the unmolested Commando's I've had or seen so can't line up tire with center of loop or mudgard. Its a non issue except visually - though many debates on why so so many came that way and some experts telling us only a few badly assembled came that way plus the rationalizations to re-spoke rim to center with stem and rear loop, which helps to fit 120-130 size rear though.
Anywho relax its normal finding not something you or DPO left out along axle. I've fudge the centering looks slightly shifting fender to DS for better mud spray coverage and repoked new rim centered in my project special. This may lead into discussion of what causes or prevents drifting hands off one side or the other though L ward mentioned most.